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nf-core/demultiplex
Edit

Demultiplexing pipeline for sequencing data

bases2fastqbcl2fastqdemultiplexingelementbiosciencesillumina
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/demultiplex
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 1.7.0
    • 1.6.1
    • 1.6.0
    • 1.5.4
    • 1.5.3
    • 1.5.2
    • 1.5.1
    • 1.5.0
    • 1.4.1
    • 1.4.0
    • 1.3.2
    • 1.3.1
    • 1.3.0
    • 1.2.0
    • 1.1.0
    • 1.0.0
    • dev
Introduction Usage Parameters Output Releases
  • 1.7.0
  • 1.6.1
  • 1.6.0
  • 1.5.4
  • 1.5.3
  • 1.5.2
  • 1.5.1
  • 1.5.0
  • 1.4.1
  • 1.4.0
  • 1.3.2
  • 1.3.1
  • 1.3.0
  • 1.2.0
  • 1.1.0
  • 1.0.0
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
106
stars
52
open issues
26
last release
3 months ago
last update
3 months ago
included modules
bases2fastqbcl2fastqbclconvertcellranger_mkfastqcheckqc and 12 more modules
included subworkflows
bcl_demultiplexfastq_contam_seqtk_krakenutils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user edmundmiller
Github user csawye01
Github user atrigila
Github user matthdsm
Github user maxulysse
Github user nschcolnicov
Github user drpatelh
Github user apeltzer
Github user Aratz
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Github user grst
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Github user adamrtalbot
Github user k1sauce
Github user nvnieuwk
Github user sam-white04
Github user Oliversinn
Github user sateeshperi
Github user cmgg-be
Github user thanhleviet
Github user FriederikeHanssen
Github user alanmmobbs93
Github user mashehu
Github user nh13
Github user robsyme
Github user TomKellyGenetics
Github user glichtenstein
Github user KevinMenden
Github user lmfaber
get help
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